Okay, so I finally got mine to work. I got most of my html extras to stay except my comments, which I used haloscan to do. Since they charged to move the comments over to blogger, and wanted to use blogger comments from now on, I figured it was easier to lose those than to make all the extra work.
Ive tinkered around with it for a bit and got it to mostly look like how I wanted to. My only peeve being the spacing between my links. They are too far apart and I couldnt find the html to make it closer. I even made a tag cloud so that I wouldnt have to deal with the same thing with my labels.